Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931398.1_cds_XP_016478237.1_69893
CDS Infomation

[gene=LOC107799609] [db_xref=GeneID:107799609] [protein=pentatricopeptide repeat-containing protein At4g35850, mitochondrial-like] [protein_id=XP_016478237.1] [location=join(18150..18174,18287..18422,18518..18680,19126..19191,19305..19402,19827..19944,20035..20244,21208..21284,23603..23696,24161..24226,24309..24386,24498..24599,25056..25166)] [gbkey=CDS]
Sequence

ATGAAGCTCCTCCGAACCCTCTCTGGACCCAGAAATCTACTGATTCGAACTATAGGGCGT
CGAAACTTCGCGGCTACACCGGAAGAGTACGCAAAGAGAAACTACGCTAACAATGAGGCT
GAATACAGCACTGTTATTAGCTCTCTAACTGCTCAGCGAAGGCATTATTTGTTGAGGGAT
GTTTATGATGACATGATGCTGGATGGTGTAAAGCCAGAGAGAGATACATTTCATTCACTT
CTTATTGGGACAATGAAGGGTGCTCGATTGCAAGATGCTTTCTTTTTCCGTGACGAAATG
AAAGCCATGGGCTTGGTCCCTGATGTTGCATTGTACAATTTCATGATATCTACATGTGGA
AAATGCAAAAATTCAGAACAAGCAGTACGGCTTTTGGAAGAAATGAAGAGATTTGAAGTC
AAGCCTACTGGACAGACCTATATCTGTCTCCTCAATGCGTGTGCAGCTGCTGGTCGGGTA
GACAGAGTGTATGCAATTGTTAGGGACATGACTGCTGCTGGTCTTGGTCTTAATAAATTC
TGCTATGCTGGACTTATAGCTGCTCACAAGAATAAGGAACCTGTCACTGATGATGTAGCT
TCCAAGATTCTTGAGCTAGTTGAGCAGTCCAAGGGTTGGTCAGCAGTTGAAGCACCTAGT
GACATTCCAGTAAGATCCATGATGGGCATGTCCGAAGAAGAACTTTACAATATCCCAACT
GCTGAGTTTGTTTTCCGGCGTGGTGGATTTTTAAATAGGGAATTCACCGTTTATCATGTT
GCATTTCATGCCTGTGCAGACCTAAAAAATGTGGAGGCGATCGATACACTTCTTGAGATG
CTTAGCAAGGACGGTAAAACACCTGATGTGTTCATTTTGATGGAAACCATGAGGTGTTAT
CTTCATTCTGGGGATCTGCAACGTGGTCGCAAACTGTTTGAGGACTACATGAGTTCGGAA
AAACCACCTATGATTGAATTATATGTGACACTTGTTGAGGGAGCAATGGTCGGTTACACT
CCTGACGGGATGCAACTCGCTCAAGAGACACTGGTAAACATGAACTCCAGGAACTTCTTC
TTGAGTCCTAAAATGGGAAGTGATCTCCTTCTTGTTGCTGCGGGTGAAAAGACTGGTGGA
TATACTACTGCAAATCTGATATGGGACATGATGCAAGCTCGTAAAATCGTACCAACATTT
CCTGCTGTTCAAGCATACTACGACGGCTTGAAGGTTCGGGAGATACCAGCTGATGATCCA
AGACTGCAACTAGTTTCTCGAACCTACAATAATCTGAGAAAGAGGTTTGGTGGGGGAGGT
GGTGGAGGAGTTGGACGACCGTAG

Peptide Sequence

PEP ID

XP_016478237.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial-like [Nicotiana tabacum]
Sequence

MKLLRTLSGPRNLLIRTIGRRNFAATPEEYAKRNYANNEAEYSTVISSLTAQRRHYLLRD
VYDDMMLDGVKPERDTFHSLLIGTMKGARLQDAFFFRDEMKAMGLVPDVALYNFMISTCG
KCKNSEQAVRLLEEMKRFEVKPTGQTYICLLNACAAAGRVDRVYAIVRDMTAAGLGLNKF
CYAGLIAAHKNKEPVTDDVASKILELVEQSKGWSAVEAPSDIPVRSMMGMSEEELYNIPT
AEFVFRRGGFLNREFTVYHVAFHACADLKNVEAIDTLLEMLSKDGKTPDVFILMETMRCY
LHSGDLQRGRKLFEDYMSSEKPPMIELYVTLVEGAMVGYTPDGMQLAQETLVNMNSRNFF
LSPKMGSDLLLVAAGEKTGGYTTANLIWDMMQARKIVPTFPAVQAYYDGLKVREIPADDP
RLQLVSRTYNNLRKRFGGGGGGGVGRP

Transcript Sequence

Gene sequence data has not been registered.